FAQ
Common questions about setup, usage, reports, and troubleshooting.
Support-first answers for when setup, indexing, reports, or maintenance are not behaving the way you expect.
Install and command issues
Command not found: spinosa
Make sure ~/.spinosa/bin is on your PATH, then open a new shell. If it still fails, re-run the install script.
I installed Spinosa, but the startup prompt never appeared
Run spinosa new again. The workspace creation step is what prints the startup prompt for your LLM tool.
Which command should I try first when something feels wrong?
Start with spinosa check <workspace>. It is the fastest way to surface missing files, broken paths, and configuration problems.
Startup and indexing
Startup seems stuck or takes too long
Startup time depends on corpus size and file mix. If it has clearly stalled, re-run the startup prompt. Spinosa is designed to resume rather than start over blindly.
The OCR output is garbled
Check the original image or scanned PDF quality first. If the source is blurry, low-contrast, or skewed, OCR quality will drop with it. Replace the file and re-run intake or setup.
Can I add more files after startup?
Yes. Use spinosa prepare <workspace> or the source intake workflow. Spinosa will convert the new files and refresh the relevant workspace structures.
Reports and evidence
My question returned a fast-path answer instead of a full report
Ask more explicitly for evidence from the corpus. Operational questions can be answered directly, while evidence requests trigger the full report pipeline.
I see ○ pending on a report
The draft exists, but verification has not finished yet. Wait for the Verifier to complete before treating the answer as settled.
The report says ⚠ corrections or ✗ failed
Treat that as a real signal, not decoration. ⚠ corrections means verification found issues but repaired them. ✗ failed means important claims could not be supported reliably.
I know the answer is in my files, but Spinosa found no evidence
Rephrase the question using alternative wording, names, or dates. If the issue persists, inspect system/dictionary.md and consider re-running startup or prepare so the corpus can be re-indexed cleanly.
For report anatomy, statuses, and dashboard charts, use Reports & Charts.
Workspace maintenance
Can I edit files in raw/?
Edit headers carefully if metadata needs fixing, but avoid rewriting source text bodies. The converted body is the evidence layer Spinosa quotes and verifies against.
How do I update Spinosa?
Use spinosa upgrade to update the CLI itself. Use spinosa update <workspace> when you need to refresh framework files inside an existing workspace.
How do I clean up stale process files?
Use the Janitor workflow. It proposes moves before anything is archived to .trash/.
Can I uninstall without losing my workspace?
Yes. spinosa uninstall removes the installed framework and leaves your workspace folders in place.
Next reads
- CLI Reference for the exact commands mentioned here
- Reports & Charts for verification states and report reading
- Corpus Structure for where configuration, dictionary, and report files live
- Glossary if a support term is unfamiliar
